STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16232.1Conserved hypothetical protein. (510 aa)    
Predicted Functional Partners:
ACN16226.1
Hypothetical protein.
  
     0.748
ACN16230.1
Hypothetical protein.
 
     0.710
ostA
OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.682
cmk5
Cmk5; Cytidine monophosphate kinase Cmk.
  
    0.666
ACN15313.1
Hypothetical protein.
  
     0.632
ACN15875.1
Putative organic solvent tolerance protein OstA precursor.
 
     0.620
ACN17993.1
Conserved hypothetical protein.
  
     0.611
ACN17992.1
Conserved hypothetical protein.
  
     0.555
ACN15672.1
Putative WD-40 repeat protein.
  
     0.554
ACN14210.1
Two-component hybrid sensor and response regulator histidine kinase (Ntr family).
  
     0.537
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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