Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcbPcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB). (683 aa)    
Predicted Functional Partners:
oadB2
OadB2; Oxaloacetate decarboxylase, beta subunit OadB.
 
 
 0.996
oadB1
OadB1; Oxaloacetate decarboxylase, beta chain OadB.
 
 
 0.995
ACN14151.1
Conserved hypothetical protein.
  
 
 0.983
argH1
ArgH1; Argininosuccinate lyase ArgH.
  
 
 0.983
ACN14590.1
Putative carbamoylphosphate synthase, large subunit.
  
 
 0.983
oadB3
OadB3; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit OadB.
 
  
 0.961
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
 
 0.958
pyk
Pyk; Pyruvate kinase (PK); Belongs to the pyruvate kinase family.
  
 
 0.956
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
  
 
 0.947
porA3
PorA3; Pyruvate:ferredoxin oxidoreductase, subunit PorA3.
  
 
 0.947
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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