STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16267.1TPR domain family protein. (489 aa)    
Predicted Functional Partners:
ACN16268.1
Putative chromosome partitioning protein ParA.
  
  
 0.607
ispH
IspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.585
ACN16269.1
Putative chromosome partitioning protein ParB; Belongs to the ParB family.
     
 0.548
ACN14260.1
Putative metallopeptidase.
 
 
 
 0.545
kdsC
KdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC.
  
    0.512
mdtP1
MdtP1; Cation/multidrug efflux pump, outer membrane efflux protein MdtP.
  
  
 0.487
ACN15129.1
Tetratricopeptide (TPR) domain protein.
 
  
 0.485
ACN15177.1
Tetratricopeptide (TPR) domain protein.
 
   
 0.473
ACN13450.1
Hypothetical protein (transmembrane family protein).
   
 
 0.470
ACN13526.1
Conserved hypothetical protein.
   
 
 0.448
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.