STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16271.1Conserved hypothetical protein. (702 aa)    
Predicted Functional Partners:
cheX1
CheX1; Chemotaxis protein CheX.
  
     0.711
cheX2
CheX2; Inhibitor CheX (inhibitor of MCP methylation protein CheC).
  
     0.697
ACN16754.1
Putative flagellar hook-associated protein.
 
     0.658
ACN16753.1
Putative flagellin.
 
    0.652
ACN16745.1
Conserved hypothetical protein.
  
    0.648
fliW
Conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.641
cheD3
CheD3; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
     0.634
flhF
FlhF; Flagella associated GTP-binding protein FlhF.
 
   
 0.602
flgE
FlgE; Flagellar hook protein FlgE.
 
     0.597
fliH
FliH; Flagellar regrowth and assembly protein FliH.
 
     0.564
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.