STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16274.1Predicted polyketide synthase. (3859 aa)    
Predicted Functional Partners:
ACN16275.1
Putative phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 0.999
ACN16399.1
Putative amino-acid acetyltransferase.
 
 
0.999
ACN15446.1
Putative multi-domain beta-ketoacyl polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
0.998
ffp
Ffp; 4-phosphopantetheinyl transferase family protein Ffp; Belongs to the P-Pant transferase superfamily.
  
 0.998
fabH1
FabH1; 3-oxoacyl-acyl carrier synthase III FabH1.
 
  
 0.991
fabH2
FabH2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
  
 0.991
fabH3
FabH3; 3-oxoacyl-acyl carrier synthase III FabH3.
  
  
 0.989
rpmF
RpmF; 50S ribosomal protein L32 (ribosomal protein I) (BL37); Belongs to the bacterial ribosomal protein bL32 family.
  
 
 0.983
rplU
RplU; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.982
ACN17362.1
Conserved hypothetical protein.
 
 
 0.982
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.