Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sigESigE homolog. (110 aa)    
Predicted Functional Partners:
rnfG2
RnfG2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
     0.700
rnfC2
RnfC2; Electron transport complex protein RnfC2.
 
   
 0.669
rnfD2
RnfD2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
   
 0.639
ACN16286.1
Cytochrome c, class III family protein.
 
     0.596
rnfE2
RnfE2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.589
rnfA2
RnfA2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.570
ACN16299.1
Putative ATPase.
  
     0.503
apbE
ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
  
 0.495
ACN14241.1
Conserved hypothetical protein.
  
     0.467
ACN16284.1
Hypothetical protein.
       0.452
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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