Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
rnfD2RnfD2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (322 aa)    
Predicted Functional Partners:
rnfG2
RnfG2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.996
rnfC2
RnfC2; Electron transport complex protein RnfC2.
 
 
 0.995
rnfE2
RnfE2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.995
rnfA2
RnfA2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.991
rnfE1
RnfE1; Electron transport complex protein Rnf; Belongs to the NqrDE/RnfAE family.
 
 
 0.981
rnfC1
RnfC1; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
 0.980
rnfG1
RnfG1; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.979
rnfA1
RnfA1; Electron transport complex protein Rnf; Belongs to the NqrDE/RnfAE family.
 
 
 0.961
rnfB
RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.908
fdhB3
FdhB3; NADH-dependent, cytoplasmic formate dehydrogenase, beta chain FdhB3 (4Fe-4S family protein).
  
 
 0.896
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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