STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltD2GltD2; Glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT). (476 aa)    
Predicted Functional Partners:
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
 0.999
ACN17828.1
Glutamate synthase; Belongs to the glutamate synthase family.
 0.999
ACN13992.1
Cytochrome-c3 hydrogenase, gamma subunit (electron transfer subunit).
 
 0.972
pyrD
PyrD; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.940
gdhA1
GdhA1; NADP-specific glutamate dehydrogenase GdhA (NADP-GDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.938
glnA1
GlnA1; Type I glutamate-ammonia ligase GlnA1 (glutamine synthetase).
  
 
 0.919
glnA2
GlnA2; Type I glutamate-ammonia ligase GlnA2 (glutamine synthetase).
  
 
 0.919
gltA2
GltA2; NADPH-dependent, homotetrameric glutamate synthase GltA.
  
  
 
0.916
carB2
CarB2; Carbamoyl-phosphate synthase, large subunit CarB2; Belongs to the CarB family.
  
 
 0.912
ACN14021.1
Putative aminohydrolase.
  
 0.911
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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