STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16404.1TRAP-type C4-dicarboxylate transport system, small permease component. (162 aa)    
Predicted Functional Partners:
ACN16405.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.964
ACN16403.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.958
ACN16406.1
Conserved hypothetical protein.
 
     0.928
argA2
ArgA2; Amino-acid acetyltransferase ArgA (N-acetylglutamate synthase) (AGS) (NAGS); Belongs to the acetyltransferase family. ArgA subfamily.
       0.768
dctM2
DctM2; TRAP-type C4-dicarboxylate permease, large subunit DctM2.
 
 
 0.457
ACN17867.1
Putative TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.439
ACN17865.1
DctP9; TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.434
dctM8
DctM8; TRAP-type C4-dicarboxylate permease, large subunit DctM5.
 
 
 0.433
ACN16407.1
Conserved hypothetical protein; Belongs to the UPF0307 family.
       0.417
ACN16408.1
Putative Fe-S oxidoreductase family protein.
       0.417
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.