STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16413.1ABC-type multidrug transport system, permease component. (581 aa)    
Predicted Functional Partners:
ACN16412.1
ABC-type multidrug transport system, ATP-binding protein.
 
  
 
0.985
pstB1
PstB1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
ACN16564.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
   
0.840
ACN13290.1
Putative molybdenum ABC-type transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
0.830
ACN16274.1
Predicted polyketide synthase.
  
 0.745
dnaK1
DnaK1; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.479
ACN16415.1
Sensory box histidine kinase (GGDEF domain protein).
     
 0.475
cbiO3
CbiO3; ABC-type cobalt importer, ATP-binding protein CbiO3.
0.472
infB
InfB; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 0.471
ACN17018.1
DNA deoxyribo-dipyrimidine photolyase family protein.
   
 
 0.464
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.