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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16428.1ABC-type nitrate/sulfonate/bicarbonate transport system, ATP binding component (ATPase). (230 aa)    
Predicted Functional Partners:
ACN16491.1
Putative ABC-type manganese/zinc transport system, permease component.
 
 
 0.960
ACN16429.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
     0.949
ACN16430.1
Sensory box histidine kinase (GGDEF domain family protein).
 
  
 0.928
ACN14325.1
ABC-type Mn2+/Zn2+ transport system, permease component.
  
 
 0.851
ACN16488.1
Putative ABC-type manganese/zinc transport system, substrate-binding component; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.702
ACN17613.1
ABC-type zinc transport system, periplasmic binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.702
cbiO2
CbiO2; ABC-type cobalt importer, ATP-binding protein CbiO2.
  
   
 0.655
fur
Fur; Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.534
ssuB
SsuB; Sulfonate ABC-type transporter, ATP-binding protein SsuB.
  
     0.519
ACN15297.1
ABC-type transporter involved in resistance to organic solvents, ATP-binding protein.
  
     0.506
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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