STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16452.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
ACN16451.1
Iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein).
    
 0.951
aor6
Aor6; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor6.
  
 
 0.830
ACN16453.1
ABC-type branched-chain amino acid transport system, ATPase component.
   
   0.788
ACN16449.1
Conserved hypothetical protein.
       0.773
ACN16454.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
ACN16455.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
ACN16448.1
Hypothetical protein.
       0.642
fixO
FixO; Cytochrome C oxidase, mono-heme subunit FixO.
  
 
 0.617
mopC
MopC; Molybdopterin oxidoreductase, membrane subunit MopC.
  
 
 0.611
mopB
MopB; Molybdopterin oxidoreductase, membrane subunit MopB.
  
 
 0.611
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.