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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16493.1Putative 4Fe-4S ferredoxin. (96 aa)    
Predicted Functional Partners:
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
  
 0.922
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
  
  
 0.661
porA3
PorA3; Pyruvate:ferredoxin oxidoreductase, subunit PorA3.
  
  
 0.661
ACN16492.1
Putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
  
 0.606
fumA
FumA; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.493
gltD3
GltD3; Glutamate synthase, beta chain GltD.
  
 
 0.411
ACN17827.1
Putative pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.410
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
  
 
 0.406
metS
MetS; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.402
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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