STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16568.1Putative metal-dependent hydrolase (TIM-barrel fold family protein). (543 aa)    
Predicted Functional Partners:
prdF1
PrdF1; Proline racemase PrdF; Belongs to the proline racemase family.
 
     0.814
ACN16567.1
ABC-type spermidine/putrescine transport system, permease component I.
 
     0.719
ACN16566.1
ABC-type spermidine/putrescine transport system, permease component II.
 
     0.710
ACN16565.1
ABC-type spermidine/putrescine transport system, periplasmic substrate-binding component.
 
     0.608
fsxA
FsxA; Suppressor protein FxsA (affecting phage T7 exclusion by the F plasmid).
  
    0.583
ACN16564.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
     0.445
ACN14312.1
Chloromuconate cycloisomerase-like protein; Catalyzes the epimerization of L-Lys-L-Arg to L-Lys-D-Arg (in vitro). Catalyzes the epimerization of positively charged dipeptides, with a preference for substrates with a basic amino acid in the second position. Has epimerase activity with L-Lys-L-Lys, L-Arg-L-Arg, L-Val- L-Arg, L-Val-L-Lys and L-Ala-L-Arg (in vitro).
 
     0.425
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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