Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACN16580.1 | ACN16581.1 | HRM2_35140 | HRM2_35150 | Hypothetical protein. | Predicted nucleoside-diphosphate-sugar pyrophosphorylase. | 0.444 |
| ACN16580.1 | ACN16641.1 | HRM2_35140 | HRM2_35760 | Hypothetical protein. | Putative colicin V production protein-like protein. | 0.645 |
| ACN16580.1 | clpS | HRM2_35140 | HRM2_26660 | Hypothetical protein. | ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.531 |
| ACN16580.1 | csrA | HRM2_35140 | HRM2_36940 | Hypothetical protein. | CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.541 |
| ACN16580.1 | ftsA | HRM2_35140 | HRM2_12750 | Hypothetical protein. | FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.482 |
| ACN16580.1 | ftsZ | HRM2_35140 | HRM2_12760 | Hypothetical protein. | FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.814 |
| ACN16580.1 | mreC | HRM2_35140 | HRM2_35260 | Hypothetical protein. | MreC; Involved in formation and maintenance of cell shape. | 0.416 |
| ACN16580.1 | rplT | HRM2_35140 | HRM2_04600 | Hypothetical protein. | RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.434 |
| ACN16581.1 | ACN16580.1 | HRM2_35150 | HRM2_35140 | Predicted nucleoside-diphosphate-sugar pyrophosphorylase. | Hypothetical protein. | 0.444 |
| ACN16581.1 | ftsZ | HRM2_35150 | HRM2_12760 | Predicted nucleoside-diphosphate-sugar pyrophosphorylase. | FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.408 |
| ACN16641.1 | ACN16580.1 | HRM2_35760 | HRM2_35140 | Putative colicin V production protein-like protein. | Hypothetical protein. | 0.645 |
| clpS | ACN16580.1 | HRM2_26660 | HRM2_35140 | ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Hypothetical protein. | 0.531 |
| clpS | csrA | HRM2_26660 | HRM2_36940 | ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.449 |
| csrA | ACN16580.1 | HRM2_36940 | HRM2_35140 | CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | Hypothetical protein. | 0.541 |
| csrA | clpS | HRM2_36940 | HRM2_26660 | CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.449 |
| csrA | ftsZ | HRM2_36940 | HRM2_12760 | CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.452 |
| ftsA | ACN16580.1 | HRM2_12750 | HRM2_35140 | FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.482 |
| ftsA | ftsZ | HRM2_12750 | HRM2_12760 | FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.999 |
| ftsA | mreC | HRM2_12750 | HRM2_35260 | FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | MreC; Involved in formation and maintenance of cell shape. | 0.559 |
| ftsZ | ACN16580.1 | HRM2_12760 | HRM2_35140 | FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Hypothetical protein. | 0.814 |
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