close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysCLysC; Aspartokinase LysC (aspartate kinase); Belongs to the aspartokinase family. (408 aa)    
Predicted Functional Partners:
asd
Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.983
hom
Homoserine dehydrogenase Hom.
 
 0.950
lysA4
LysA4; Diaminopimelate decarboxylase LysA (DAP decarboxylase).
    
 0.913
ACN17636.1
Probable aspartokinase (Aspartate kinase); Belongs to the aspartokinase family.
  
  
 
0.913
asnB
AsnB; Glutamine-hydrolyzing asparagine synthetase AsnB.
  
 
 0.881
argG
ArgG; Argininosuccinate synthase ArgG (Citrulline--aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.871
ACN16651.1
Conserved hypothetical protein.
      0.864
purA
PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.842
ACN16221.1
Putative aspartate/tyrosine/aromatic acid aminotransferase.
  
 0.842
aspG
AspG; L-asparaginase AspG.
     
 0.814
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.