STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoB3AtoB3; acetyl-CoA acetyltransferase AtoB3 (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)    
Predicted Functional Partners:
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
 
 0.998
hbd1
Hbd1; 3-hydroxybutyryl-CoA dehydrogenase Hbd1.
 0.985
ACN14117.1
3-hydroxyacyl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD).
 0.983
ACN13426.1
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.973
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
 
 0.938
aac
Aac; acetoacetyl-CoA synthetase (AMP-binding protein).
  
 
 0.935
acsM2
AcsM2; middle-chain-fatty-acid-acyl-CoA synthetase AcsM2 (AMP-binding protein).
  
 
 0.935
acsA1
AcsA1; acetyl-CoA synthetase/acetate-CoA ligase AcsA1 (AMP-binding protein).
  
 
 0.935
acsM4
AcsM4; middle-chain-fatty-acid-acyl-CoA synthetase AcsM4 (AMP-binding protein).
  
 
 0.935
gltA1
GltA1; Citrate (si)-synthase GltA1; Belongs to the citrate synthase family.
  
 0.929
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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