STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motA3MotA3; Chemotaxis protein MotA (motility protein A). (298 aa)    
Predicted Functional Partners:
motB3
MotB3; Chemotaxis protein MotB (motility protein B).
 
 0.997
motB1
MotB1; Flagellar motor protein MotB (PomB homolog).
 
 0.990
motB2
MotB2; Chemotaxis protein motB (Motility protein B).
 
 0.989
motB4
MotB4; Flagellar motor protein MotB.
 
 0.970
fliG
FliG; Flagellar motor switch protein FliG.
 
  
 0.956
flgC
FlgC; Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.953
fliP
FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.952
fliQ
FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.951
fliN
FliN; Flagellar motor switch protein FliN (type III secretion pathway protein).
 
  
 0.946
fliF
FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.936
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.