STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuBNeuB; Sialic acid synthase NeuB (N-acetylneuraminate synthase) (N-acetylneuraminic acid synthase). (349 aa)    
Predicted Functional Partners:
murG2
MurG2; UDP-N-acetylglucosamine--N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG.
 
 
 0.998
arnB
ArnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.966
ACN16729.1
Putative polysaccharide biosynthesis protein (NAD-dependent epimerase/dehydratase family protein).
 
  
 0.961
neuA
NeuA; N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase) (CMP-sialic acid synthetase).
 
 
 0.957
kdsC
KdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC.
   
 0.881
ACN16735.1
Putative ATPAse of LPS biosynthesis.
 
   0.764
ACN16745.1
Conserved hypothetical protein.
 
  
 0.679
wecB
WecB; UDP-N-acetylglucosamine 2-epimerase WecB (UDP-GlcNAc-2- epimerase); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.631
rfbB
RfbB; dTDP-glucose 4,6-dehydratase RfbB; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.600
ACN16754.1
Putative flagellar hook-associated protein.
  
  
 0.575
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.