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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgAFlgA; Flagella basal body P-ring formation protein FlgA [precursor]. (310 aa)    
Predicted Functional Partners:
flgH
FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.996
flgI
FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.993
fliM
FliM; Flagellar motor switch protein FliM.
 
  
 0.992
flgG2
FlgG2; Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family.
 
  
 0.989
flgJ
FlgJ; Peptidoglycan hydrolase FlgJ (muramidase FlgJ).
 
  
 0.988
flgE
FlgE; Flagellar hook protein FlgE.
 
  
 0.986
flgF
FlgF; Flagellar basal-body rod protein FlgF.
 
  
 0.983
fliN
FliN; Flagellar motor switch protein FliN (type III secretion pathway protein).
 
  
 0.983
fliG
FliG; Flagellar motor switch protein FliG.
 
  
 0.982
flgB
FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.982
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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