STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliOFliO; Flagellar biosynthesis protein FliO. (121 aa)    
Predicted Functional Partners:
fliN
FliN; Flagellar motor switch protein FliN (type III secretion pathway protein).
  
  
 0.995
fliR
FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
  
  
 0.994
fliM
FliM; Flagellar motor switch protein FliM.
  
 
 0.994
flhF
FlhF; Flagella associated GTP-binding protein FlhF.
  
  
 0.987
fliQ
FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
  
 0.986
fliP
FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.986
flhB2
FlhB2; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.981
flgD
FlgD; Basal-body rod modification protein FlgD.
  
  
 0.979
fliG
FliG; Flagellar motor switch protein FliG.
  
  
 0.979
fliJ
FliJ; Flagellar basal-body protein FliJ.
  
  
 0.977
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.