Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fliKFliK; Flagellar hook-length control protein FliK. (615 aa)    
Predicted Functional Partners:
ACN16782.1
Conserved hypothetical protein.
  
  
 0.933
fliI
FliI; Flagellum-specific ATP synthase FliI.
  
  
 0.933
fliG
FliG; Flagellar motor switch protein FliG.
  
  
 0.932
fliJ
FliJ; Flagellar basal-body protein FliJ.
  
  
 0.931
fliH
FliH; Flagellar regrowth and assembly protein FliH.
  
  
 0.931
fliF
FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.930
fliE
FliE; Flagellar hook-basal body complex protein FliE.
  
  
 0.927
flgC
FlgC; Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.905
flgD
FlgD; Basal-body rod modification protein FlgD.
  
 
 0.900
flgB
FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.900
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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