STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16811.1Pyridoxal-dependent decarboxylase family protein. (554 aa)    
Predicted Functional Partners:
gabT
GabT; 4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.985
panC
PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.951
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
    
 0.944
ACN14276.1
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.932
putA2
PutA2; NAD-dependent aldehyde dehydrogenase PutA; Belongs to the aldehyde dehydrogenase family.
   
 0.922
ACN16918.1
NAD-dependent aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 0.922
gdhA1
GdhA1; NADP-specific glutamate dehydrogenase GdhA (NADP-GDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.921
glnA1
GlnA1; Type I glutamate-ammonia ligase GlnA1 (glutamine synthetase).
  
 
 0.918
glnA2
GlnA2; Type I glutamate-ammonia ligase GlnA2 (glutamine synthetase).
  
 
 0.918
ACN17828.1
Glutamate synthase; Belongs to the glutamate synthase family.
     
 0.910
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.