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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porB1PorB1; Pyruvate:ferredoxin oxidoreductase, subunit PorB1. (269 aa)    
Predicted Functional Partners:
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
 0.999
porA3
PorA3; Pyruvate:ferredoxin oxidoreductase, subunit PorA3.
 0.999
porC1
PorC1; Pyruvate:ferredoxin oxidoreductase, subunit PorC1.
 0.998
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
 0.998
porC2
PorC2; Pyruvate:ferredoxin oxidoreductase, subunit PorC2.
 0.993
ACN14181.1
2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit.
 
 0.992
porA1
PorA1; Pyruvate:ferredoxin oxidoreductase, subunit PorA1'.
 
 0.990
ACN14183.1
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
 
 0.973
fdx9
Fdx9; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx9.
 
  
 0.941
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
  
 
 0.922
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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