STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16835.1ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. (296 aa)    
Predicted Functional Partners:
ACN16834.1
ABC-type transporter, periplasmic substrate binding protein.
    0.997
ACN16836.1
ABC-type transporter, ATP-binding protein (ATPase).
    0.996
ACN13329.1
Conserved hypothetical protein.
 
    0.888
ACN16093.1
Conserved hypothetical protein.
 
    0.886
typA
TypA; GTP-binding eleongation factor TypA (Tyrosine phosphorylated protein A).
       0.701
ACN16838.1
Conserved hypothetical protein.
       0.652
ACN16951.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA; Cold-shock inducible two-component sensory box histidine kinase /regulatory protein (Ntr family protein).
 
  
 0.637
ACN15517.1
Two-component protein, sensory box histidine kinase/response regulatory protein.
  
    0.578
ACN16831.1
Putative methyl-accepting chemotaxis protein.
       0.520
tlpB
TlpB; Methyl-accepting chemotaxis transducer TlpB.
       0.520
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.