STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp3Usp3; Nucleotide-binding universal stress protein Usp. (322 aa)    
Predicted Functional Partners:
sucC4
SucC4; succinyl-CoA synthetase, beta subunit SucC3 (GNAT domain family protein).
  
  
 0.786
ACN17706.1
Conserved hypothetical protein.
  
 
 0.682
ACN14800.1
Conserved hypothetical protein.
  
     0.665
ACN16839.1
Hypothetical protein.
       0.574
ACN17078.1
Response regulator receiver protein.
 
     0.557
ACN17125.1
Conserved hypothetical protein.
 
     0.531
ACN14883.1
Putative protein-specific endoprotease CAAX (prenyl protease 1).
  
     0.482
ACN16874.1
Hypothetical protein.
  
     0.451
draG2
DraG2; ADP-ribosylglycohydrolase DraG.
 
     0.444
ACN15559.1
GTPase family protein.
  
     0.440
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (26%) [HD]