STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16842.1Sigma-54 dependent DNA-binding response regulator. (470 aa)    
Predicted Functional Partners:
ACN16843.1
Two-component sensory box histidine kinase/response regulator.
 
 
 
 0.909
draG2
DraG2; ADP-ribosylglycohydrolase DraG.
       0.773
rpoN
RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.656
ACN13250.1
Signal transduction histidine kinase (ATPase).
 
 
 0.605
ACN17656.1
Signal transduction histidine kinase.
 
 
 
 0.592
atoS3
AtoS3; Sensor protein AtoS3 (PAS domain protein).
 
 
 
 0.545
ACN17639.1
Signal transduction histidine kinase.
 
 
 0.536
cheA2
CheA2; Chemotaxis protein CheA.
  
 
 0.501
ACN14653.1
Two-component hybrid sensor and response regulator histidine kinase.
 
 
 0.492
ACN16174.1
Fusion protein comosed of N:signal transduction protein - C:ATPase-like osmosensitive K+ channel histidine kinase.
 
 
 0.447
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.