STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16855.1Two-component fusion protein (N:Acyl-CoA reductase-C:Coenzyme F390 synthetase). (869 aa)    
Predicted Functional Partners:
ACN16854.1
Conserved hypothetical protein.
 
     0.952
srf
Srf; Anti-sigma regulatory factor Srf (sigma-B negative effector/serine-protein kinase).
 
     0.941
ACN17013.1
Acetamidase/formamidase family protein.
  
  
  0.933
ACN16856.1
Putative H(+)-antiporter protein (permease of the major facilitator superfamily).
 
     0.909
ACN16851.1
Hypothetical protein.
       0.686
ACN16852.1
Hypothetical protein.
       0.686
matE
MATE efflux family protein MatE.
       0.644
hisC3
HisC3; Histidinol-phosphate aminotransferase HisC (Imidazole acetol-phosphate transaminase).
       0.643
ACN16848.1
Hypothetical protein.
       0.634
ACN17592.1
Signal transduction histidine kinase.
  
     0.557
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.