STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA3UspA3; Universal stress protein UspA. (130 aa)    
Predicted Functional Partners:
ACN14979.1
Conserved hypothetical protein.
  
     0.444
gdhA4
GdhA4; NAD-specific glutamate dehydrogenase GdhA.
  
     0.431
nadC3
NadC3; High affinity sodium/sulphate-dependent symporter NadC3.
  
    0.429
gdhA2
GdhA2; NAD-specific glutamate dehydrogenase GdhA (NAD-GDH).
  
     0.419
ACN14153.1
Beta-lactam acylase family protein precursor.
  
     0.418
ACN17597.1
Putative phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.418
gdhA3
GdhA3; NAD-specific glutamate dehydrogenase GdhA.
  
     0.415
gdhA5
GdhA5; NAD-specific glutamate dehydrogenase GdhA.
  
     0.403
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.