STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctP6DctP6; TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP6. (350 aa)    
Predicted Functional Partners:
dctM6
DctM6; TRAP-type C4-dicarboxylate permease, large subunit DctM6.
 
  
 0.904
dctQ6
DctQ6; TRAP-type C4-dicarboxylate permease, small subunit DctQ6.
 
  
 0.899
dctM5
DctM5; TRAP-type C4-dicarboxylate permease, large subunit DctM5.
 
  
 0.796
ACN14508.1
Conserved hypothetical protein.
 
  
 0.795
ACN15740.1
Putative C4-dicarboxylate transporter family protein (DctM subunit).
 
  
 0.793
dctM7
DctM7; TRAP-type C4-dicarboxylate permease, large subunit DctM7.
 
  
 0.786
dctQ5
DctQ5; TRAP-type C4-dicarboxylate permease, small subunit DctQ5.
 
  
 0.784
ACN14507.1
Conserved hypothetical protein.
 
  
 0.783
dctQ7
DctQ7; TRAP-type C4-dicarboxylate permease, small subunit DctQ7.
 
  
 0.730
ACN16571.1
TRAP-type C4-dicarboxylate transport system, large permease component.
  
    0.615
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.