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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16897.1HTH-type transcriptional regulator (LysR family protein); Belongs to the LysR transcriptional regulatory family. (282 aa)    
Predicted Functional Partners:
ACN16896.1
Hypothetical protein.
       0.568
ACN16274.1
Predicted polyketide synthase.
  
  
 0.508
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
  
  
 0.506
ACN13229.1
Putative porin D precursor (outer membrane protein D2) (imipenem/basic amino acid-specific outer membrane pore).
  
   
 0.475
ACN16898.1
NADPH-dependent FMN reductase, iron-sulfur flavoprotein.
       0.447
ACN15990.1
Putative HTH-type transcriptional regulator.
  
  
 0.416
hutC
HutC; Histidine utilization repressor HutC.
  
  
 0.413
ACN13979.1
Zn-dependent dehydrogenase.
 
   
 0.404
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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