STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhA3GdhA3; NAD-specific glutamate dehydrogenase GdhA. (1048 aa)    
Predicted Functional Partners:
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
     
 0.936
putA2
PutA2; NAD-dependent aldehyde dehydrogenase PutA; Belongs to the aldehyde dehydrogenase family.
 
 
 0.918
gdhA1
GdhA1; NADP-specific glutamate dehydrogenase GdhA (NADP-GDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.910
glnA1
GlnA1; Type I glutamate-ammonia ligase GlnA1 (glutamine synthetase).
     
 0.908
glnA2
GlnA2; Type I glutamate-ammonia ligase GlnA2 (glutamine synthetase).
     
 0.908
ACN17828.1
Glutamate synthase; Belongs to the glutamate synthase family.
     
 0.904
gltA2
GltA2; NADPH-dependent, homotetrameric glutamate synthase GltA.
     
 0.903
gltD2
GltD2; Glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT).
     
 0.903
ACN16811.1
Pyridoxal-dependent decarboxylase family protein.
     
 0.903
gdhA2
GdhA2; NAD-specific glutamate dehydrogenase GdhA (NAD-GDH).
  
  
 
0.901
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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