STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acd11Acd11; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd11 (butyryl-CoA dehydrogenase). (405 aa)    
Predicted Functional Partners:
gcdA1
GcdA1; glutaconyl-CoA decarboxylase GcdA.
 
 0.958
oadB2
OadB2; Oxaloacetate decarboxylase, beta subunit OadB.
    
  0.943
fadA
FadA; 3-ketoacyl-CoA thiolase FadA (Acetyl-CoA acyltransferase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.941
oadB1
OadB1; Oxaloacetate decarboxylase, beta chain OadB.
     
  0.900
acd12
Acd12; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd12 (butyryl-CoA dehydrogenase).
  
  
 
0.900
etfA2
EtfA2; Electron transfer flavoprotein, alpha-subunit EtfA2 (alpha-ETF) (ETFLS).
 
 0.835
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
  
 0.803
pcaC
PcaC; 4-carboxymuconolactone decarboxylase PcaC.
     
 0.774
etfA3
EtfA3; Electron transfer flavoprotein, alpha-subunit EtfA3 (alpha-ETF) (ETFLS).
 
 0.755
etfA4
EtfA4; Electron transfer flavoprotein, alpha-subunit EtfA4 (alpha-ETF) (ETFLS).
 
 0.743
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.