STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16949.1Ferredoxin (4Fe-4S iron-sulfur cluster binding protein). (361 aa)    
Predicted Functional Partners:
qmoB
QmoB; Quinone-interacting membrane-bound oxidoreductase complex, subunit QmoB.
  
 
 0.875
gltA2
GltA2; NADPH-dependent, homotetrameric glutamate synthase GltA.
 
      0.849
hdrF2
HdrF2; Heterodisulfide reductase, subunit HdrF2 (selenocysteine containing protein, HdrCB homoloque).
  
 
 0.840
ACN16948.1
Transcriptional regulator (PadR family protein).
 
     0.815
hdrD3
HdrD3; Heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein).
  
 
 0.797
gltD2
GltD2; Glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT).
 
      0.795
gltD3
GltD3; Glutamate synthase, beta chain GltD.
    
 0.781
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
      0.662
fdhB5
FdhB5; Formate dehydrogenase, beta chain FdhB5 (4Fe-4S family protein).
 
 
 0.657
ACN16160.1
Putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD).
 
 
 0.561
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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