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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16952.1Putative uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (314 aa)    
Predicted Functional Partners:
ACN16064.1
Putative flavin-containing amine oxidoreductase family protein.
  
  
 0.664
ACN16342.1
Putative two-component hybrid sensor and regulator protein.
 
   
 0.651
ACN16953.1
Ferredoxin (4Fe-4S iron-sulfur cluster binding protein).
 
    0.624
ACN17914.1
Putative galactose-1-phosphate uridylyltransferase.
  
    0.616
hemC
HemC; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 
 0.613
ACN14022.1
Putative two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein).
  
     0.606
ACN14675.1
O-methyltransferase, family 2.
 
     0.602
ACN16954.1
Hypothetical protein.
 
     0.593
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
 
   
 0.591
ACN16990.1
TPR domain family protein.
  
   
 0.569
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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