STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16964.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
ACN14151.1
Conserved hypothetical protein.
  
     0.712
ACN17941.1
Putative transcriptional regulator.
  
     0.585
hipA
HipA; Transcriptional regulator HipA.
  
     0.552
ACN13661.1
Putative DNA repair protein.
  
     0.547
ACN13871.1
Multiheme cytochrome family protein.
  
     0.479
ACN16286.1
Cytochrome c, class III family protein.
  
     0.473
ACN16823.1
Conserved hypothetical protein.
  
     0.454
ACN17727.1
Putative Fe-S cluster.
  
     0.433
ACN16293.1
Putative cAMP-dependent protein kinase, regulatory subunit.
  
     0.432
asmA
AsmA; Out membrane assemby protein AsmA.
  
     0.415
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.