STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16973.1Putative choline dehydrogenase and related flavoprotein. (446 aa)    
Predicted Functional Partners:
ACN15672.1
Putative WD-40 repeat protein.
    
 0.938
ACN13537.1
Putative ankyrin repeat protein.
    
 0.928
ACN14615.1
Hypothetical protein.
 
 
 0.808
fixO
FixO; Cytochrome C oxidase, mono-heme subunit FixO.
  
 
 0.782
ACN14623.1
Conserved hypothetical protein.
  
 
 0.782
ACN16974.1
Conserved hypothetical protein.
      
0.651
ACN16425.1
Putative coenzyme F420 hydrogenase, beta subunit (8-hydroxy-5-deazaflavin-reducing hydrogenase, beta subunit) (FRH).
  
     0.571
ACN16274.1
Predicted polyketide synthase.
     
 0.548
ACN13979.1
Zn-dependent dehydrogenase.
  
  
 0.528
ACN13162.1
Hypothetical protein; Similar to Kinesin light chain 1 (KLC 1).
  
 
 0.499
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.