STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16977.1ABC-type lipoprotein release transporter, permease component. (414 aa)    
Predicted Functional Partners:
ACN16976.1
ABC-type lipoprotein release transporter, ATP-binding protein (ATPase).
 
 
 0.976
ACN16979.1
Conserved hypothetical protein.
 
 
 
 0.964
lolF
LolF; Outer membrane lipoprotein-sorting protein LolF.
 
 
 
 0.873
lolD2
LolD2; ABC-type lipoprotein transporter, ATP binding component LolD (ATPase).
 
 
 0.800
ACN13519.1
Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.765
ACN16980.1
Hypothetical protein.
       0.737
lolD3
LolD3; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.731
ACN16978.1
Iron-molybdenum cluster-binding family protein.
  
    0.728
ACN13696.1
Predicted ABC-type transporter, ATP-binding protein.
 
 
 0.689
ACN15461.1
ABC-type transporter, ATP-binding protein.
 
 
 0.685
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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