STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN16988.1Conserved hypothetical protein. (619 aa)    
Predicted Functional Partners:
ACN14674.1
Radical SAM domain protein (Fe-S oxidoreductase).
  
     0.695
ACN14876.1
Putative methyltransferase.
  
     0.695
truA2
TruA2; tRNA pseudouridine synthase TruA (Uracil hydrolyase).
       0.634
ACN16990.1
TPR domain family protein.
       0.583
ACN16995.1
Hypothetical protein.
  
  
 0.530
ACN17002.1
Conserved hypothetical protein.
  
  
 0.530
ACN17029.1
Conserved hypothetical protein.
  
     0.514
narK
NarK; Nitrate/nitrite transport protein NarK.
  
     0.494
ACN17767.1
Putative ATP-dependent DNA helicase.
 
    0.458
gspJ2
GspJ2; General secretion pathway protein GspK.
  
     0.426
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.