Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadLFadL; Outer membrane protein transporter FadL (OMPP1/FadL/TodX family protein). (433 aa)    
Predicted Functional Partners:
bamD
Putative DNA uptake lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.841
ACN15339.1
Outer membrane protein (putative surface antigen).
  
 
 
 0.833
ACN15681.1
Putative outer membrane surface antigen protein.
    
 
 0.799
mip1
Mip1; FKBP-type 22KD peptidyl-prolyl cis-trans isomerase Mip (rotamase).
    
 
 0.791
mip2
Mip2; Outer membrane protein MIP precursor mip.
    
 
 0.791
ACN16274.1
Predicted polyketide synthase.
     
 0.498
ACN13289.1
Conserved hypothetical protein.
 
  
 0.427
ACN16399.1
Putative amino-acid acetyltransferase.
     
 0.403
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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