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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17002.1Conserved hypothetical protein. (177 aa)    
Predicted Functional Partners:
ACN17003.1
GGDEF domain family protein.
     0.826
psdD
PsdD; Phosphatidylserine decarboxylase proenzyme PsdD; Belongs to the phosphatidylserine decarboxylase family.
  
     0.544
ACN17560.1
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
  
     0.536
ACN13630.1
Putative methyltransferase.
  
  
 0.530
ACN13786.1
Radical SAM domain protein.
  
  
 0.530
ACN14019.1
Putative methyltransferase (radical SAM domain).
  
  
 0.530
ACN14389.1
Radical SAM domain protein.
  
  
 0.530
hemN1
HemN1; Oxygen-independent coproporphyrinogen III oxidase (Fe-S oxidoreductase).
  
  
 0.530
ACN14673.1
Radical SAM domain protein (Fe-S oxidoreductase).
  
  
 0.530
ACN14674.1
Radical SAM domain protein (Fe-S oxidoreductase).
  
  
 0.530
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.