STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17034.1Conserved hypothetical protein. (257 aa)    
Predicted Functional Partners:
ACN17283.1
Hypothetical protein.
   
    0.674
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
   0.663
ACN17965.1
Single-strand binding protein (Helix-destabilizing protein).
  
 
 0.647
hsdR3
HsdR3; Type I site-specific restriction-modification system, restriction subunit HsdR (helicase family protein); Belongs to the peptidase S24 family.
       0.562
leuS
LeuS; leucyl-tRNA synthetase LeuS (Leucine--tRNA ligase); Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.538
polA
PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.506
ACN17767.1
Putative ATP-dependent DNA helicase.
   
 
 0.474
metS
MetS; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.446
pheT
PheT; phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.433
ACN15028.1
Integrase family protein.
  
     0.424
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.