STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17047.1Two-component fusion protein (N:nitroreductase family protein-C:ferredoxin domain). (338 aa)    
Predicted Functional Partners:
ACN17046.1
Hypothetical protein.
       0.773
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
   
 
 0.690
birA
BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.629
smuG
SmuG; Monofunctional, single-strand selective uracil-DNA glycosylase SmuG.
  
    0.626
ACN17899.1
ABC-type transport system, ATP-binding protein.
  
  
 0.600
ACN16274.1
Predicted polyketide synthase.
  
 
 0.586
fabG8
FabG8; 3-oxoacyl (acyl-carrier protein) reductase FabG8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.572
ACN17706.1
Conserved hypothetical protein.
  
  
 0.551
ACN17827.1
Putative pyridine nucleotide-disulfide oxidoreductase.
  
  
 0.539
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
  
 0.533
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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