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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtP1MdtP1; Cation/multidrug efflux pump, outer membrane efflux protein MdtP. (473 aa)    
Predicted Functional Partners:
arcE
ArcE; Cation/multidrug efflux pump, periplasmic resistance protein AcrE (Acriflavine resistance protein E precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.930
arcD
ArcD; Cation/multidrug efflux pump, integral membrane protein AcrD (AcrB/AcrD/AcrF family protein); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.897
ACN17366.1
Putative membrane efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.796
ACN17070.1
Conserved hypothetical protein.
       0.773
ACN17071.1
Conserved hypothetical protein.
       0.773
ACN17072.1
Conserved hypothetical protein.
       0.773
ACN17794.1
Secretion protein, HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.758
tolC
TolC; Predicted outer membrane protein.
  
     0.754
acrB
AcrB; Cation/multidrug efflux pump, integral membrane protein AcrB (Acriflavin resistance family protein).
 
 
 0.749
arcA
ArcA; Cation/multidrug efflux pump, periplasmic resistance protein AcrA (Acriflavine resistance protein A precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.742
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.