STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA5UspA5; Universal stress protein UspA. (367 aa)    
Predicted Functional Partners:
mdtP2
MdtP2; Cation/multidrug efflux pump, outer membrane efflux protein MdtP.
 
   
 0.802
acrB
AcrB; Cation/multidrug efflux pump, integral membrane protein AcrB (Acriflavin resistance family protein).
     
 0.774
arcA
ArcA; Cation/multidrug efflux pump, periplasmic resistance protein AcrA (Acriflavine resistance protein A precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.773
ACN17706.1
Conserved hypothetical protein.
  
 
 0.741
ACN14800.1
Conserved hypothetical protein.
  
     0.676
ACN14883.1
Putative protein-specific endoprotease CAAX (prenyl protease 1).
  
     0.668
arcD
ArcD; Cation/multidrug efflux pump, integral membrane protein AcrD (AcrB/AcrD/AcrF family protein); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.637
mdtP1
MdtP1; Cation/multidrug efflux pump, outer membrane efflux protein MdtP.
     
 0.637
arcE
ArcE; Cation/multidrug efflux pump, periplasmic resistance protein AcrE (Acriflavine resistance protein E precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.636
ACN17070.1
Conserved hypothetical protein.
       0.636
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.