STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17082.1Sigma-54 dependent DNA-binding response regulator (NtrC family proten). (476 aa)    
Predicted Functional Partners:
ACN17083.1
Two-component sensory box histidine kinase (N:ATP-binding domain-C:sensory box histidine kinase).
 
 
 0.948
ACN17084.1
Conserved hypothetical protein.
       0.742
ACN17085.1
Hypothetical protein.
       0.689
rpoN
RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.665
ACN16880.1
Two-component sensory box histidine kinase/response regulator.
 
 
 0.510
cheA2
CheA2; Chemotaxis protein CheA.
  
 
 0.501
acuB3
AcuB3; Acetoin utilization protein AcuB.
   
   0.499
flhA
FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.426
flhF
FlhF; Flagella associated GTP-binding protein FlhF.
  
  
 0.424
fliG
FliG; Flagellar motor switch protein FliG.
  
  
 0.423
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.