STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17119.1Ferredoxin (4Fe-4S iron-sulfur cluster binding protein). (255 aa)    
Predicted Functional Partners:
ACN17118.1
Conserved hypothetical protein.
 
     0.692
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
   
 
 0.579
hcp
Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
     0.506
ACN13898.1
Conserved hypothetical protein.
  
     0.493
ACN15209.1
NADPH-dependent FMN reductase.
  
     0.484
ACN14763.1
Iron-sulfur binding hydrogenase.
 
   
 0.440
hdrD3
HdrD3; Heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein).
    
   0.420
mvhG
MvhG; F420-non-reducing hydrogenase, iron-sulfur subunit mvhG.
    
   0.408
mvhA
MvhA; F420-non-reducing hydrogenase, iron-sulfur subunit mvhA.
    
   0.408
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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