STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydB2CydB2; Cytochrome bd-type ubiquinol oxidase, subunit II (CydB). (338 aa)    
Predicted Functional Partners:
cydA2
CydA2; Cytochrome bd-type ubiquinol oxidase, subunit I (CydA).
 0.999
cydA1
CydA1; Cytochrome bd-type ubiquinol oxidase, subunit I (CydA).
 
 0.993
cydB1
CydB1; Cytochrome bd-type ubiquinol oxidase, subunit II (CydB).
  
  
 
0.923
ACN17176.1
ATPase family protein.
  
  
 0.833
hyfI
HyfI; Hydrogenase HyfI homolog, small subunit.
     
 0.672
nox1
Nox1; NADH oxidase (NOXase).
    
 0.604
flgH
FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
   0.592
flgF
FlgF; Flagellar basal-body rod protein FlgF.
    
   0.592
fliQ
FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
    
   0.592
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
     
 0.561
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.