STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17145.1SH3 domain family protein. (204 aa)    
Predicted Functional Partners:
ACN14247.1
Putative general secretion pathway protein L.
  
     0.646
ACN13483.1
Putative virulence factor (pectin lyase fold protein).
 
     0.526
ACN17144.1
Hypothetical protein.
       0.522
umuD2
UmuD2; DNA polymerase V/DNA repair protein UmuD; Belongs to the peptidase S24 family.
       0.522
umuC1
UmuC1; DNA repair protein UmuC.
       0.522
ACN17148.1
Hypothetical protein.
       0.522
hdrF1-2
HdrF1; Heterodisulfide reductase, subunit HdrF1 (HdrC homologue protein).
  
     0.494
ACN17149.1
Fe-S oxidoreductase family protein.
       0.473
ACN17705.1
Conserved hypothetical protein.
  
     0.417
dctQ4
DctQ4; TRAP-type C4-dicarboxylate permease, small subunit DctQ4.
  
     0.407
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.