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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resAResA; Thiol-disulfide oxidoreductase ResA. (185 aa)    
Predicted Functional Partners:
ACN17152.1
Peroxiredoxin (AhpC/TSA family protein).
       0.802
fdhB7
FdhB7; Periplasmic formate dehydrogenase, beta subunit FdhB7 (4Fe-4S family protein).
     
 0.580
fdhA7
FdhA7; Periplasmic formate dehydrogenase, alpha subunit FdhA7 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.555
ubiE5
UbiE5; Menaquinone biosynthesis (SAM-dependent) methyltransferase UbiE.
       0.543
msrAB
MsrAB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.495
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.